This page is about how to use OCTOPUS.
The system information on OCTOPUS is detailed from here.
note: Most of these pages are written in Japanese. English version is being prepared now.
First of all
Usage for novice
HPCI usage for novice
1. Connection
How to login
How to login (for HPCI users)
How to login (for SX-ACE,VCC users)
How to File Transfer (local - OCTOPUS)
How to File Transfer (SQUID - OCTOPUS)
How to transfer file (account A - account B)
How to use shared straoge (for HPCI user)
2. Front-end
How to use a front-end node
How to use a file system
How to Check for Resource Usage
3. Coding
A Basic way to make your program
How to use editor
How to use intel compiler(FORTRAN/C/C++)
How to use GNU Compiler(Fortran/C/C++)
How to use Python(2.7/3.4)
How to use Octave
How to use R
How to use Julia
How to use development support tools
4. Program execution
About batch processing
How to Describe a Job Script
Example of job scripts
About scheduler commands
OCTOPUS Job Class Table
OCTOPUS Point
How to use general purpose CPU nodes
How to execute a serial program on CPU node
About interactive use
How to use intelMPI
Optimization/SIMD
OpenMP/Auto parallelization
How to use intel MPI and Intranode parallelism
How to use OpenMPI
How to use MVAPICH2
How to use Xeon Phi nodes
How to execute a serial program on Xeon Phi node
About interactive use
How to use GPU nodes
How to execute a serial program on GPU node
About interactive use
How to use Large-scale shared-memory nodes
Reservation for using Large-scale shared-memory node(from Nov 2022)
How to execute a serial program on Large-scale shared-memory node
About interactive use
5. Application
a list of software and library installed
Caffe*
Chainer*
FreeFem++
GAMESS
Gaussian16*
GROMACS*
HΦ
Intel MKL
Intel Parallel Studio XE tool set
OpenFOAM
LAMMPS*
TensorFlow*
Theano*
Torch
FrontFlow/blue
FrontISTR
GENESIS
MODYLAS
NTChem
OpenMX
PHASE/0
SALMON
SMASH
mVMC
AkaiKKR
ALAMODE
Phonopy
How to install FLASH code
Quantum ESPRESSO