Can I install and use uniquely MPI on SQUID?
Yes, you can install OpenMPI. In the case, you have to make module file as the following:
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#%Module 1.0 # # OMP-sample # proc ModulesHelp { } { puts stderr "OMP-sample\n" } prepend-path PATH /sqfs/work/(your installed path)/bin prepend-path LD_LIBRARY_PATH /sqfs/work/(your installed path)/lib/ setenv MPI_ROOT /sqfs/work/(your installed path)/ |
You specify module file in job script as the following:
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#PBS -T openmpi #PBS -v NQSV_MPI_MODULE=module file PATH |